Search Target Gene by miRNA name:

name: or Novel_miR1

Search Target Gene by miRNA sequence:

sequence:

You can search the targets of known and novel miRNAs published in Liu Z et al 2017 The target ID is linked to GBrowse for sequence and annotation information. An output example is listed bellow:

Predicted targets for Novel_miR1

Target ID: Capana05g001773

256	5'-TATGTTGCTCGGACTCTTCATAAATGTCAACAT-3'	288	cleavage site: 273
	        ||||||||||||o|| ||||||
	     3'-ACGAGCCTGAGAGGTTTTTACAA-5'
320	5'-TATGTTGCTCGGACTCTTCCAAAATGTCAACAG-3'	352	cleavage site: 337
	        ||||||||||||o| |||||||
	     3'-ACGAGCCTGAGAGGTTTTTACAA-5'

Target ID: Capana12g000994

101	5'-GTCTTGGCTTGGACTCTCCAAAAATATTACCGT-3'	133	cleavage site: 118
	         |||o||||||||||||||| ||
	     3'-ACGAGCCTGAGAGGTTTTTACAA-5'

Target ID: Capana06g000619

1068	5'-CATGTTGCTCGAACTCTCCCAAAATGTTGTTGC-3'	1100	cleavage site: 1085
	        |||||| ||||||| ||||||||
	     3'-ACGAGCCTGAGAGGTTTTTACAA-5'

Target ID: Capana09g002381

145	5'-GAAGGTGCTCGGACTCTGAAAAAATGTTGCCGC-3'	177	cleavage site: 162
	        ||||||||||||  |||||||||
	     3'-ACGAGCCTGAGAGGTTTTTACAA-5'

Target ID: Capana03g001401

775	5'-TATGTTGCTCAGACTCTTCAAAAATATTGA-3'	807	cleavage site: 792
	        ||||| ||||||o||||||| ||
	     3'-ACGAGCCTGAGAGGTTTTTACAA-5'

Target ID: Capana04g001536

6087	5'-TATGTTGCTCGGAGTCTTCAAAAATGTTGCCGG-3'	6119	cleavage site: 6104
	        |||||||| |||o||||||||||
	     3'-ACGAGCCTGAGAGGTTTTTACAA-5'